Skip to Content
Merck
  • A DNA-based molecular probe for optically reporting cellular traction forces.

A DNA-based molecular probe for optically reporting cellular traction forces.

Nature methods (2014-10-13)
Brandon L Blakely, Christoph E Dumelin, Britta Trappmann, Lynn M McGregor, Colin K Choi, Peter C Anthony, Van K Duesterberg, Brendon M Baker, Steven M Block, David R Liu, Christopher S Chen
ABSTRACT

We developed molecular tension probes (TPs) that report traction forces of adherent cells with high spatial resolution, can in principle be linked to virtually any surface, and obviate monitoring deformations of elastic substrates. TPs consist of DNA hairpins conjugated to fluorophore-quencher pairs that unfold and fluoresce when subjected to specific forces. We applied TPs to reveal that cellular traction forces are heterogeneous within focal adhesions and localized at their distal edges.

MATERIALS
Product Number
Brand
Product Description

Supelco
Phenol solution, certified reference material, 500 μg/mL in methanol
Supelco
Riboflavin (B2), analytical standard
Sigma-Aldrich
Acetonitrile, HPLC Plus, ≥99.9%, poly-coated bottles
Sigma-Aldrich
Dimethyl sulfoxide, anhydrous, ≥99.9%
Sigma-Aldrich
Acetonitrile, ≥99.5%, ACS reagent
Supelco
Phenol, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Argon-40Ar, 99.95 atom %
USP
Phenol, United States Pharmacopeia (USP) Reference Standard
Sigma-Aldrich
Ethyl alcohol, Pure, 140 proof, Excise Tax-free, Permit for use required
Sigma-Aldrich
Urea, Vetec, reagent grade, 99%
Sigma-Aldrich
Ethylenediaminetetraacetic acid, Vetec, reagent grade, 98%
Sigma-Aldrich
Phenol, natural, 97%, FG
Sigma-Aldrich
Phenol, BioUltra, TE-saturated, ~73% (T)
Sigma-Aldrich
8-Octanoyloxypyrene-1,3,6-trisulfonic acid trisodium salt, suitable for fluorescence, ≥90% (HPCE)
Sigma-Aldrich
Phenol, BioUltra, ≥99.5% (GC)
Sigma-Aldrich
Phenol, puriss., meets analytical specification of Ph. Eur., BP, USP, 99.5-100.5% (GC)
Supelco
Dimethyl sulfoxide, analytical standard
Sigma-Aldrich
5-Carboxyfluorescein N-succinimidyl ester, BioReagent, suitable for fluorescence, ≥90% (HPLC)
Supelco
Phenol solution, 100 μg/mL in acetonitrile, PESTANAL®, analytical standard
Sigma-Aldrich
Phenol solution, Equilibrated with 10 mM Tris HCl, pH 8.0, 1 mM EDTA, BioReagent
Sigma-Aldrich
Phenol solution, BioReagent, Saturated with 0.01 M citrate buffer, pH 4.3 ± 0.2
Sigma-Aldrich
Liquified Phenol, ≥89.0%
Sigma-Aldrich
Phenol
Sigma-Aldrich
Phenol, ACS reagent, ≥99.0%
Supelco
Phenol solution, 5000 μg/mL in methanol, certified reference material
Supelco
5α-Androstan-17β-ol-3-one, VETRANAL®, analytical standard
Sigma-Aldrich
Dimethyl sulfoxide, Hybri-Max, sterile-filtered, BioReagent, suitable for hybridoma, ≥99.7%
USP
Dimethyl sulfoxide, United States Pharmacopeia (USP) Reference Standard
Sigma-Aldrich
Urea, BioUltra, 99% (T)
Supelco
Urea, 8 M (after reconstitution with 16 mL high purity water)