AMPKs
The AMP-activated protein kinase (AMPK) acts as a sensor of cellular energy status. AMPK exists as heterotrimeric complexes comprising a catalytic α subunit and regulatory β and γ subunits. In mammals, each of these subunits is encoded by multiple genes and at least 12 possible combinations of subunit isoforms are possible. The α subunits (α1, α2) contain the kinase domain at the N-terminus followed by a C-terminal region that is required for formation of the αβγ complex. The β subunits (β1, β2) contain short, variable N-terminal regions followed by two more highly conserved regions. The first is now recognized to be a glycogen-binding domain (related to N-isoamylase domains that are found in enzymes that metabolize the α1->6 branches in α1->4 linked glucans such as glycogen) that causes AMPK to associate with glycogen particles inside the cell. The C-terminal conserved region is required for the formation of the αβγ complex. The γ subunit isoforms (γ1, γ2, γ3) contain variable N-terminal regions of unknown function, followed by four tandem repeats of a sequence termed a CBS motif. These motifs, which also occur in a small number of other proteins, act in pairs to form two domains that bind the regulatory nucleotides, AMP and ATP, in a mutually exclusive manner. Binding of AMP to the two sites is highly co-operative. Mutations within the AMP binding sites of the γ2 and γ3 isoforms cause glycogen storage disorders in cardiac muscle in humans and skeletal muscle in pigs, respectively.
The AMPK system is activated by cellular stresses that cause a drop in the cellular ATP:ADP ratio either by interfering with ATP synthesis (e.g. metabolic poisons, hypoxia, glucose starvation) or by increasing ATP consumption (e.g. contraction in muscle). An increase in the cellular ADP:ATP ratio is amplified into a much larger increase in AMP:ATP by adenylate kinase. AMP binds to the two sites on the γ subunit (an effect antagonized by high ATP). This promotes phosphorylation within the α subunit by the upstream kinase, which is essential for AMPK activity. The major form of the upstream kinase is a complex between the tumor suppressor LKB1, and two accessory subunits, STRAD and MO25. AMP binding also allosterically activates the phosphorylated AMPK complex. Dissociation of AMP both reverses the allosteric activation and also promotes dephosphorylation to switch the kinase off again.
Once activated, AMPK switches on catabolic processes that generate ATP, such as the uptake and oxidation of glucose and fatty acids. It also switches off processes that consume ATP that are not essential for the short-term survival of the cell. This includes the biosynthesis of fatty acids, cholesterol, glycogen and protein. AMPK switches off protein biosynthesis and cell growth in part by down-regulating the TOR (target-of-rapamycin) pathway. AMPK causes both short-term effects via direct phosphorylation of metabolic enzymes, and longer-term effects by modulating gene expression.
AMPK is a prime target for drugs aimed at treatment of obesity and Type 2 diabetes. It can be activated in intact cells and in vivo using the nucleoside 5-aminoimidazole-4-carboxamide riboside (AICAR), which is taken up by cells and converted to the equivalent monophosphorylated nucleotide, ZMP, which mimics all of the effects of AMP. AMPK is also activated in intact cells and/or in vivo by two major classes of anti-diabetic drugs, i.e. the biguanides (metformin and phenformin) and the thiazolidinediones (rosiglitazone and pioglitazone). These drugs appear to act indirectly on AMPK, possibly via inhibition of the respiratory chain, and it remains uncertain to what extent their therapeutic benefits are mediated by AMPK.
The Table below contains accepted modulators and additional information. For a list of additional products, see the "Similar Products" section below.
| Isoforms | α1 | α2 | β1 | β2 |
|---|---|---|---|---|
| Molecular Weight (kDa) | 62.8 kDa | 62.3 kDa | 30.1 kDa | 30.3 kDa |
| Structural Data | 550 aa | 552 aa | 269 aa Myristoylation | 272 aa Myristoylation |
| Species | Human | Human | Human | Human |
| Domain Organization | Kinase domain Complex formation | Kinase domain Complex formation | Glycogen binding Complex formation | Glycogen binding Complex formation |
| Phosphorylation Sites | Thr172 (by LKB1, CaMKKs) Thr258 Ser485 | Thr172 (by LKB1, CaMKKs) Thr258 Ser491 | Ser24/S25 Ser96 Ser101 Ser108 Ser182 | Not Known |
| Tissue Distribution | Ubiquitous | Muscle Liver | Ubiquitous | Skeletal/cardiac Muscle Others |
| Subcellular Localization | Cytoplasmic | Nuclear Cytoplasmic | Extranuclear Nuclear | Cytoplasm |
| Binding Partners/ Associated Proteins | β and γ subunits | β and γ subunits | α and γ subunits glycogen | α and γ subunits glycogen |
| Upstream Activators | LKB1/STRAD/MO25 Calmodulin-dependent protein kinases (CaMKKs) | LKB1/STRAD/MO25 Calmodulin-dependent protein kinases (CaMKKs) | Not Known | Not Known |
| Downstream Activation | Not Known | Not Known | Not Known | Not Known |
| Activatorsa | AICAR (A9978) Metformin (D150959) Rosiglitazone (R2408) Pioglitazone (E6910) | AICAR (A9978) Metformin (D150959) Rosiglitazone (R2408) Pioglitazone (E6910) | Not Known | Not Known |
| Inhibitorsb | Compound C2 | Compound C2 | Not Known | Not Known |
| Selective Activators | Not Known | Not Known | Not Known | Not Known |
| Physiological Function | Catalytic | Catalytic | Glycogen-binding | Glycogen-binding |
| Disease Relevance | Not Known | Mouse KO: Insulin resistant Glucose intolerant | Not Known | Not Known |
| Isoforms | γ1 | γ2 | γ3 |
|---|---|---|---|
| Molecular Weight (kDa) | 37.6 kDa | 63.1 kDa | 51.5 kDa |
| Structural Data | 331 aa | 569 aa Myristoylation | 464 aa |
| Species | Human | Human | Human |
| Domain Organization | AMP/ATP-binding (two sites) | AMP/ATP-binding (two sites) | AMP/ATP-binding (two sites) |
| Phosphorylation Sites | Not Known | Not Known | Not Known |
| Tissue Distribution | Ubiquitous | Skeletal/cardiac Muscle Others | Skeletal muscle |
| Subcellular Localization | Cytoplasm | Cytoplasm | Cytoplasm |
| Binding Partners/ Associated Proteins | α and β subunits | α and β subunits | α and β subunits |
| Upstream Activators | Not Known | Not Known | Not Known |
| Downstream Activation | Not Known | Not Known | Not Known |
| Activatorsa | Not Known | Not Known | Not Known |
| Inhibitorsb | Not Known | Not Known | Not Known |
| Selective Activators | Not Known | Not Known | Not Known |
| Physiological Function | AMP/ATP-binding | AMP/ATP-binding | AMP/ATP-binding |
| Disease Relevance | Not Known | Mutations: Cardiac glycogen increased, Cardiac arrhythmias | Mutations (pig): Skeletal muscle glycogen increased |
Footnotes
a) These activators only work in intact cells and require an intact αβγ complex
b) Compound C may inhibit the isolated kinase domain of the α subunit but has only been tested on the intact αβγ complex; see Zhou, et al., J. Clin. Invest., 108, 1167-1174 (2001).
References
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